BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F01LP1|AL429923
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1397 1565 0.0
>3x_Contig1397
Length = 8011
Score = 1565 bits (772), Expect = 0.0
Identities = 815/848 (96%)
Strand = Plus / Plus
Query: 1 ttttcattctatgggcaacggatcgggatcatccaacatcatagaaacgtcttgtggttc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4880 ttttctttctatgggcaacggatcgggatcatccaacatcatagaaacgtcttgtggttc 4939
Query: 61 gttccatatcgttggtggaccctcagcgaacgataaagatttcatcactttgcttggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4940 gttccatatcgttggtggaccctcagcgaacgataaagatttcatcactttgcttggtgt 4999
Query: 121 cacgtcgggggaaccctcgcccatcataccttgtttcatcagcttctgtctccatgtagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5000 cacgtcgggggaaccctcgcccatcataccttgtttcatcagcttctgtctccatgtagg 5059
Query: 181 ctgctgtttttgcatcggcgawgawcttttccgttgagttgawacgtttaawtgttgtgc 240
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 5060 ctgctgtttttgcatcggcgatgatcttttccgttgagttgatacgtttaattgttgtgc 5119
Query: 241 aaattgawcaaattcttgawctaacttattcaawttgttcaawtcccgttcaatggtccc 300
||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 5120 aaattgatcaaattcttgatctaacttattcaatttgttcaattcccgttcaatggtccc 5179
Query: 301 caccattgttgtatttgawccawcagtgttttcgttttcawctacwawacwcttggataw 360
|||||||||||||||||| ||| ||||||||||||||||| |||| | || ||||||||
Sbjct: 5180 caccattgttgtatttgatccatcagtgttttcgttttcatctactatactcttggatat 5239
Query: 361 aattwggaaawgcgawcwcaawattggawcctcaawaactttttccatcagtctagtgcc 420
|||| ||||| |||| | ||| |||||| |||||| ||||||||||||||||||||||||
Sbjct: 5240 aatttggaaatgcgatctcaatattggatcctcaataactttttccatcagtctagtgcc 5299
Query: 421 attgaccaagawcwcgtttctaactgawtctgawaawccgcttatcagaatctcawattg 480
||||||||||| | ||||||||||||| ||||| || |||||||||||||||||| ||||
Sbjct: 5300 attgaccaagatctcgtttctaactgattctgataatccgcttatcagaatctcatattg 5359
Query: 481 ttcgaaatcaatggcctcttgccaatactcgcagtctcgcatttttttcaactggatggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5360 ttcgaaatcaatggcctcttgccaatactcgcagtctcgcatttttttcaactggatggt 5419
Query: 541 tttcatatatactaaggtacgaacgaaatcatttggatcatcgaattgaacttcaagttc 600
|||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 5420 tttcatatattctaaggtacgatcgatatcatttggatcatcgaattgaacttcaagttc 5479
Query: 601 attcatcttcaacaaaatctgttcttgaataatatggatgtagtctgtaagaaataccgc 660
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5480 attcatcttcaacaaaatctgttcttgaataatatggatgttgtctgtaagaaataccgc 5539
Query: 661 cctttcatcattcaagttgttcaaatattgcagtacgttgcttaactcgaaatgaactag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5540 cctttcatcattcaagttgttcaaatattgcagtacgttgcttaactcgaaatgaactag 5599
Query: 721 ctttagatagtgtcgtttcaccaacatcaatgattttatcaattttgcatcttgaatctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5600 ctttagatagtgtcgtttcaccaacatcaatgattttatcaattttgcatcttgaatctt 5659
Query: 781 ttccgaatctgaaagatgaatcctcatttctcgtacggattctttaatcaacatattaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5660 ttccgaatctgaaagatgaatcctcatttctcgtacggattctttaatcaacatattaac 5719
Query: 841 tttttccc 848
||||||||
Sbjct: 5720 tttttccc 5727
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5904
Number of Sequences: 1807
Number of extensions: 5904
Number of successful extensions: 132
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)